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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015887012.1_cds_XP_016441262.1_36641
CDS Infomation

[gene=LOC107766888] [db_xref=GeneID:107766888] [protein=oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic-like] [protein_id=XP_016441262.1] [location=join(44629..45183,45831..45906,47250..47344,47508..47591,48537..48624,49049..49173,49257..49355,49461..49532)] [gbkey=CDS]
Sequence

ATGCTTACTCCAATTCTCTCTTCTCCTTCATCCTCTTCCACTCCCACTTCCCAATTTCCT
CATTCTTTCCATTCTTCATTTTCATTTTTAACTAAACCCCACTTACCCTTTACTGTATCC
TATAAAACAGCTAAAAAACCAACACCCAACTATTCATTTAAAATTCAAGCAATGATTGAG
AAAGAAGTAGCTGAATCCCAAAAGCCAGATACATTTCTTCGAGAATCGGATAAAGGATCC
AATGTTACTTCAAGTTCGAGTTCAGTTAGAGGTCGATTTGAGAAGATGATAAGAGAAGCT
CAAGACAGTGTGTGTTTGGCAATAGAAAAAGCGGACGGAGGAGCAAAGTTTAAGGAAGAT
GTTTGGTCAAGGCCTGGTGGTGGCGGTGGAATCAGTAGGGTTTTGCAAGATGGGGCTATT
TGGGAAAAGGCTGGTGTTAATGTTTCTGTTGTTTATGGTGTTATGCCTCCTGAAGCTTAT
CGGGCTGCTAGACCCACTGATAATGGAAATGTCAAGCCCGGCCCTATTCCTTTTTTTGCT
GCTGGAGTTAGCTCTGTGCTGCATCCAAAAAATCCATTTGCGCCAACTTTGCATTTTAAT
TATCGTTACTTTGAGACTGATGCTCCAAAAGATGCACCAGGAGCACCAAGGCAATGGTGG
TTTGGTGGTGGTACTGACCTTACACCTGCTTACATTTTCGAGGAGGATGTGAAGCACTTC
CATTCGGTGCAAAAAGCTGCTTGTGATAAATTCGATGCTAGCTTCTACCCTCGGTTTAAG
AAATGGTGTGATGACTATTTCTATATTAAGCATCGTGGTGAGAGGCGAGGTCTTGGAGGA
ATTTTCTTTGATGATCTGAACGACTATGATCAAGAAATGCTTCTTTCCTTTTCTACAGAG
TGCGCAAATTCCGTCATTCCAGCATATATACCTATCATAGAGAAGAGGAAGGATACCCCT
TTCACAGAAGAAAACAAAGCATGGCAACAACTACGGAGGGGCCGCTATGTGGAATTCAAC
TTGGTTTATGACCGTGGAACTACATTTGGTCTCAAGACAGGAGGTAGGATTGAGAGCATT
CTTGTATCTCTTCCATTAACTGCACGATGGGAGTATGACCATCAACCAGAAGAAGGCACT
GAAGAATGGAAACTCTTGGATGCTTGTATCAACCCTAAGGAATGGATCTGCTAG

Peptide Sequence

PEP ID

XP_016441262.1
PEP Infomation

PREDICTED: oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic-like [Nicotiana tabacum]
Sequence

MLTPILSSPSSSSTPTSQFPHSFHSSFSFLTKPHLPFTVSYKTAKKPTPNYSFKIQAMIE
KEVAESQKPDTFLRESDKGSNVTSSSSSVRGRFEKMIREAQDSVCLAIEKADGGAKFKED
VWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYGVMPPEAYRAARPTDNGNVKPGPIPFFA
AGVSSVLHPKNPFAPTLHFNYRYFETDAPKDAPGAPRQWWFGGGTDLTPAYIFEEDVKHF
HSVQKAACDKFDASFYPRFKKWCDDYFYIKHRGERRGLGGIFFDDLNDYDQEMLLSFSTE
CANSVIPAYIPIIEKRKDTPFTEENKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESI
LVSLPLTARWEYDHQPEEGTEEWKLLDACINPKEWIC

Transcript Sequence

Gene sequence data has not been registered.